Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nr1i3O35627 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nr1i3O35627 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nr1i3O35627 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.73■□□□□ 0.43
Nr1i3O35627 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nr1i3O35627 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.73■□□□□ 0.43
Nr1i3O35627 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.73■□□□□ 0.43
Nr1i3O35627 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Nr1i3O35627 Gm2274-201ENSMUST00000184539 609 ntBASIC17.73■□□□□ 0.43
Nr1i3O35627 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.73■□□□□ 0.43
Nr1i3O35627 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.73■□□□□ 0.43
Nr1i3O35627 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nr1i3O35627 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nr1i3O35627 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nr1i3O35627 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nr1i3O35627 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nr1i3O35627 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Nr1i3O35627 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nr1i3O35627 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.72■□□□□ 0.43
Nr1i3O35627 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Nr1i3O35627 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Nr1i3O35627 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.72■□□□□ 0.43
Nr1i3O35627 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.72■□□□□ 0.43
Nr1i3O35627 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.72■□□□□ 0.43
Nr1i3O35627 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.72■□□□□ 0.43
Nr1i3O35627 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nr1i3O35627 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nr1i3O35627 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Nr1i3O35627 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nr1i3O35627 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nr1i3O35627 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Nr1i3O35627 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nr1i3O35627 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Nr1i3O35627 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nr1i3O35627 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nr1i3O35627 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Nr1i3O35627 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nr1i3O35627 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nr1i3O35627 Gm5417-201ENSMUST00000079706 384 ntBASIC17.71■□□□□ 0.43
Nr1i3O35627 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.71■□□□□ 0.43
Nr1i3O35627 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.71■□□□□ 0.43
Nr1i3O35627 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nr1i3O35627 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.71■□□□□ 0.43
Nr1i3O35627 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nr1i3O35627 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nr1i3O35627 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.71■□□□□ 0.42
Nr1i3O35627 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nr1i3O35627 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Nr1i3O35627 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1i3O35627 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Nr1i3O35627 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1i3O35627 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1i3O35627 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1i3O35627 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1i3O35627 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1i3O35627 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1i3O35627 Gm36967-201ENSMUST00000193814 266 ntBASIC17.7■□□□□ 0.42
Nr1i3O35627 Gm18421-201ENSMUST00000204122 625 ntBASIC17.7■□□□□ 0.42
Nr1i3O35627 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1i3O35627 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1i3O35627 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1i3O35627 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.7■□□□□ 0.42
Nr1i3O35627 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1i3O35627 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1i3O35627 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1i3O35627 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1i3O35627 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1i3O35627 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1i3O35627 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1i3O35627 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nr1i3O35627 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nr1i3O35627 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Nr1i3O35627 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1i3O35627 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1i3O35627 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1i3O35627 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1i3O35627 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1i3O35627 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1i3O35627 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nr1i3O35627 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.69■□□□□ 0.42
Nr1i3O35627 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms