Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6bO35451 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atf6bO35451 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.34□□□□□ -0.11
Atf6bO35451 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Atf6bO35451 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.34□□□□□ -0.11
Atf6bO35451 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.34□□□□□ -0.11
Atf6bO35451 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.34□□□□□ -0.11
Atf6bO35451 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.34□□□□□ -0.11
Atf6bO35451 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Atf6bO35451 Gm18101-201ENSMUST00000215769 548 ntBASIC14.34□□□□□ -0.11
Atf6bO35451 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.34□□□□□ -0.11
Atf6bO35451 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.34□□□□□ -0.11
Atf6bO35451 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atf6bO35451 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atf6bO35451 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Atf6bO35451 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atf6bO35451 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atf6bO35451 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atf6bO35451 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Atf6bO35451 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Atf6bO35451 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Atf6bO35451 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atf6bO35451 Gm10013-201ENSMUST00000106074 672 ntBASIC14.33□□□□□ -0.12
Atf6bO35451 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atf6bO35451 Gm22697-201ENSMUST00000175194 63 ntBASIC14.33□□□□□ -0.12
Atf6bO35451 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Atf6bO35451 Mir1668-201ENSMUST00000184114 107 ntBASIC14.33□□□□□ -0.12
Atf6bO35451 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Atf6bO35451 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atf6bO35451 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atf6bO35451 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Atf6bO35451 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.33□□□□□ -0.12
Atf6bO35451 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atf6bO35451 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.33□□□□□ -0.12
Atf6bO35451 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Atf6bO35451 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atf6bO35451 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Atf6bO35451 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atf6bO35451 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atf6bO35451 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atf6bO35451 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Atf6bO35451 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atf6bO35451 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Atf6bO35451 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.32□□□□□ -0.12
Atf6bO35451 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atf6bO35451 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Atf6bO35451 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atf6bO35451 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Atf6bO35451 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.32□□□□□ -0.12
Atf6bO35451 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atf6bO35451 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atf6bO35451 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Atf6bO35451 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.32□□□□□ -0.12
Atf6bO35451 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Atf6bO35451 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atf6bO35451 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atf6bO35451 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atf6bO35451 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.32□□□□□ -0.12
Atf6bO35451 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atf6bO35451 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atf6bO35451 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atf6bO35451 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atf6bO35451 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atf6bO35451 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.32□□□□□ -0.12
Atf6bO35451 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Atf6bO35451 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.31□□□□□ -0.12
Atf6bO35451 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6bO35451 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6bO35451 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.31□□□□□ -0.12
Atf6bO35451 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6bO35451 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6bO35451 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Atf6bO35451 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6bO35451 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6bO35451 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.31□□□□□ -0.12
Atf6bO35451 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atf6bO35451 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms