Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf11bO08712 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tnfrsf11bO08712 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Tnfrsf11bO08712 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tnfrsf11bO08712 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tnfrsf11bO08712 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tnfrsf11bO08712 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Tnfrsf11bO08712 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Tnfrsf11bO08712 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Gm7370-201ENSMUST00000219471 767 ntBASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf11bO08712 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf11bO08712 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Dancr-204ENSMUST00000132389 2347 ntBASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Gm18115-201ENSMUST00000221209 621 ntBASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf11bO08712 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.73■□□□□ 0.27
Tnfrsf11bO08712 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms