Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3727J3QM54 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Gm3727J3QM54 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3727J3QM54 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3727J3QM54 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.09□□□□□ -0.15
Gm3727J3QM54 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3727J3QM54 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3727J3QM54 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3727J3QM54 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3727J3QM54 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3727J3QM54 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm3727J3QM54 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm3727J3QM54 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm3727J3QM54 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm3727J3QM54 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm3727J3QM54 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Gm3727J3QM54 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Gm3727J3QM54 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Gm3727J3QM54 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm3727J3QM54 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3727J3QM54 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3727J3QM54 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3727J3QM54 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3727J3QM54 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3727J3QM54 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3727J3QM54 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3727J3QM54 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3727J3QM54 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Gm3727J3QM54 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3727J3QM54 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.08□□□□□ -0.16
Gm3727J3QM54 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3727J3QM54 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3727J3QM54 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm3727J3QM54 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.07□□□□□ -0.16
Gm3727J3QM54 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.07□□□□□ -0.16
Gm3727J3QM54 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.07□□□□□ -0.16
Gm3727J3QM54 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm3727J3QM54 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3727J3QM54 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Gm3727J3QM54 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3727J3QM54 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Flg-201ENSMUST00000050758 1488 ntBASIC14.06□□□□□ -0.16
Gm3727J3QM54 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm3727J3QM54 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3727J3QM54 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3727J3QM54 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3727J3QM54 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3727J3QM54 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Gm3727J3QM54 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3727J3QM54 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3727J3QM54 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm3727J3QM54 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms