Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3139J3QK78 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.45■□□□□ 0.22
Gm3139J3QK78 Gm18669-201ENSMUST00000216049 778 ntBASIC16.45■□□□□ 0.22
Gm3139J3QK78 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3139J3QK78 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3139J3QK78 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Gm3139J3QK78 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3139J3QK78 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3139J3QK78 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3139J3QK78 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3139J3QK78 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3139J3QK78 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3139J3QK78 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3139J3QK78 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3139J3QK78 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3139J3QK78 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3139J3QK78 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3139J3QK78 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.44■□□□□ 0.22
Gm3139J3QK78 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.44■□□□□ 0.22
Gm3139J3QK78 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Gm3139J3QK78 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Gm3139J3QK78 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3139J3QK78 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.44■□□□□ 0.22
Gm3139J3QK78 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3139J3QK78 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3139J3QK78 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3139J3QK78 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3139J3QK78 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Gm3139J3QK78 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3139J3QK78 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3139J3QK78 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3139J3QK78 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Gm3139J3QK78 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.43■□□□□ 0.22
Gm3139J3QK78 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3139J3QK78 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Gm3139J3QK78 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.43■□□□□ 0.22
Gm3139J3QK78 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Gm3139J3QK78 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3139J3QK78 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3139J3QK78 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3139J3QK78 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3139J3QK78 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3139J3QK78 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3139J3QK78 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3139J3QK78 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Gm3139J3QK78 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.41■□□□□ 0.22
Gm3139J3QK78 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm3139J3QK78 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3139J3QK78 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3139J3QK78 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Gm3139J3QK78 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3139J3QK78 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.4■□□□□ 0.22
Gm3139J3QK78 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3139J3QK78 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.4■□□□□ 0.22
Gm3139J3QK78 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.4■□□□□ 0.22
Gm3139J3QK78 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm3139J3QK78 Gm28033-201ENSMUST00000184224 96 ntBASIC16.4■□□□□ 0.22
Gm3139J3QK78 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms