Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NpcdF8VQB8 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.83■□□□□ 0.76
NpcdF8VQB8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NpcdF8VQB8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NpcdF8VQB8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
NpcdF8VQB8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NpcdF8VQB8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NpcdF8VQB8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NpcdF8VQB8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NpcdF8VQB8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NpcdF8VQB8 Gm13036-201ENSMUST00000117799 748 ntBASIC19.82■□□□□ 0.76
NpcdF8VQB8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.82■□□□□ 0.76
NpcdF8VQB8 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.82■□□□□ 0.76
NpcdF8VQB8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
NpcdF8VQB8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NpcdF8VQB8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NpcdF8VQB8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NpcdF8VQB8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NpcdF8VQB8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NpcdF8VQB8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Gm25745-201ENSMUST00000174945 133 ntBASIC19.81■□□□□ 0.76
NpcdF8VQB8 Gm27628-201ENSMUST00000184911 107 ntBASIC19.81■□□□□ 0.76
NpcdF8VQB8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NpcdF8VQB8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.81■□□□□ 0.76
NpcdF8VQB8 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.81■□□□□ 0.76
NpcdF8VQB8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
NpcdF8VQB8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NpcdF8VQB8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NpcdF8VQB8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NpcdF8VQB8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NpcdF8VQB8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.8■□□□□ 0.76
NpcdF8VQB8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NpcdF8VQB8 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.8■□□□□ 0.76
NpcdF8VQB8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.8■□□□□ 0.76
NpcdF8VQB8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NpcdF8VQB8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NpcdF8VQB8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.8■□□□□ 0.76
NpcdF8VQB8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NpcdF8VQB8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NpcdF8VQB8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
NpcdF8VQB8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NpcdF8VQB8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NpcdF8VQB8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NpcdF8VQB8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NpcdF8VQB8 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.79■□□□□ 0.76
NpcdF8VQB8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
NpcdF8VQB8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
NpcdF8VQB8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.79■□□□□ 0.76
NpcdF8VQB8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC19.79■□□□□ 0.76
NpcdF8VQB8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NpcdF8VQB8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NpcdF8VQB8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NpcdF8VQB8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NpcdF8VQB8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
NpcdF8VQB8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NpcdF8VQB8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NpcdF8VQB8 Idnk-204ENSMUST00000226010 1898 ntBASIC19.78■□□□□ 0.76
NpcdF8VQB8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.78■□□□□ 0.76
NpcdF8VQB8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NpcdF8VQB8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NpcdF8VQB8 Gm44872-201ENSMUST00000207864 420 ntBASIC19.78■□□□□ 0.76
NpcdF8VQB8 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.78■□□□□ 0.76
NpcdF8VQB8 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NpcdF8VQB8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NpcdF8VQB8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NpcdF8VQB8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NpcdF8VQB8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NpcdF8VQB8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NpcdF8VQB8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NpcdF8VQB8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NpcdF8VQB8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NpcdF8VQB8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NpcdF8VQB8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NpcdF8VQB8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NpcdF8VQB8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NpcdF8VQB8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NpcdF8VQB8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NpcdF8VQB8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NpcdF8VQB8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NpcdF8VQB8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NpcdF8VQB8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.77■□□□□ 0.76
NpcdF8VQB8 Mir8117-201ENSMUST00000184773 107 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms