Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.78■□□□□ 0.76
Ube4aE9Q735 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ube4aE9Q735 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube4aE9Q735 Gm10355-201ENSMUST00000097146 517 ntBASIC19.78■□□□□ 0.76
Ube4aE9Q735 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ube4aE9Q735 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.78■□□□□ 0.76
Ube4aE9Q735 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube4aE9Q735 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ube4aE9Q735 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ube4aE9Q735 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ube4aE9Q735 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ube4aE9Q735 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ube4aE9Q735 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ube4aE9Q735 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ube4aE9Q735 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ube4aE9Q735 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ube4aE9Q735 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
Ube4aE9Q735 Gm12350-201ENSMUST00000121208 462 ntBASIC19.77■□□□□ 0.76
Ube4aE9Q735 Gm27525-201ENSMUST00000184465 107 ntBASIC19.77■□□□□ 0.76
Ube4aE9Q735 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.77■□□□□ 0.76
Ube4aE9Q735 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.77■□□□□ 0.76
Ube4aE9Q735 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.77■□□□□ 0.76
Ube4aE9Q735 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ube4aE9Q735 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ube4aE9Q735 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4aE9Q735 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4aE9Q735 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4aE9Q735 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4aE9Q735 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.76■□□□□ 0.75
Ube4aE9Q735 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.76■□□□□ 0.75
Ube4aE9Q735 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4aE9Q735 Gm25990-201ENSMUST00000102440 86 ntBASIC19.76■□□□□ 0.75
Ube4aE9Q735 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4aE9Q735 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4aE9Q735 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4aE9Q735 Gm1401-201ENSMUST00000122048 772 ntBASIC19.76■□□□□ 0.75
Ube4aE9Q735 Gm12497-201ENSMUST00000138778 237 ntBASIC19.76■□□□□ 0.75
Ube4aE9Q735 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.76■□□□□ 0.75
Ube4aE9Q735 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4aE9Q735 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4aE9Q735 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4aE9Q735 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ube4aE9Q735 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.76■□□□□ 0.75
Ube4aE9Q735 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ube4aE9Q735 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4aE9Q735 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ube4aE9Q735 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4aE9Q735 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4aE9Q735 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4aE9Q735 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4aE9Q735 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4aE9Q735 Gm13418-201ENSMUST00000119097 944 ntBASIC19.75■□□□□ 0.75
Ube4aE9Q735 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4aE9Q735 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4aE9Q735 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4aE9Q735 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4aE9Q735 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.75■□□□□ 0.75
Ube4aE9Q735 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.75■□□□□ 0.75
Ube4aE9Q735 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.75■□□□□ 0.75
Ube4aE9Q735 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4aE9Q735 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4aE9Q735 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4aE9Q735 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4aE9Q735 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ube4aE9Q735 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4aE9Q735 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4aE9Q735 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4aE9Q735 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube4aE9Q735 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ube4aE9Q735 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube4aE9Q735 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube4aE9Q735 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.74■□□□□ 0.75
Ube4aE9Q735 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ube4aE9Q735 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube4aE9Q735 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube4aE9Q735 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube4aE9Q735 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube4aE9Q735 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube4aE9Q735 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ube4aE9Q735 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.74■□□□□ 0.75
Ube4aE9Q735 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ube4aE9Q735 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube4aE9Q735 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Gm4459-201ENSMUST00000118750 468 ntBASIC19.73■□□□□ 0.75
Ube4aE9Q735 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Gm25406-201ENSMUST00000157599 105 ntBASIC19.73■□□□□ 0.75
Ube4aE9Q735 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Gm9172-201ENSMUST00000212092 954 ntBASIC19.73■□□□□ 0.75
Ube4aE9Q735 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube4aE9Q735 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.73■□□□□ 0.75
Ube4aE9Q735 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms