Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb9E9Q5G2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhb9E9Q5G2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb9E9Q5G2 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.39■□□□□ 0.69
Pcdhb9E9Q5G2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb9E9Q5G2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pcdhb9E9Q5G2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb9E9Q5G2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb9E9Q5G2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhb9E9Q5G2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb9E9Q5G2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb9E9Q5G2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb9E9Q5G2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb9E9Q5G2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb9E9Q5G2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb9E9Q5G2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb9E9Q5G2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb9E9Q5G2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb9E9Q5G2 Gm13312-201ENSMUST00000119631 718 ntBASIC19.37■□□□□ 0.69
Pcdhb9E9Q5G2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdhb9E9Q5G2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb9E9Q5G2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb9E9Q5G2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb9E9Q5G2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcdhb9E9Q5G2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
Pcdhb9E9Q5G2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb9E9Q5G2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb9E9Q5G2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb9E9Q5G2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb9E9Q5G2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb9E9Q5G2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pcdhb9E9Q5G2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb9E9Q5G2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb9E9Q5G2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.34■□□□□ 0.69
Pcdhb9E9Q5G2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb9E9Q5G2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb9E9Q5G2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms