Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Gm15198-201ENSMUST00000117283 177 ntBASIC9.24□□□□□ -0.93
Herc1E9PZP8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Herc1E9PZP8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC9.24□□□□□ -0.93
Herc1E9PZP8 AC147366.1-201ENSMUST00000227671 852 ntBASIC9.24□□□□□ -0.93
Herc1E9PZP8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC9.24□□□□□ -0.93
Herc1E9PZP8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Gm16570-201ENSMUST00000161951 436 ntBASIC9.24□□□□□ -0.93
Herc1E9PZP8 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Gm15824-201ENSMUST00000119516 955 ntBASIC9.24□□□□□ -0.93
Herc1E9PZP8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC9.24□□□□□ -0.93
Herc1E9PZP8 Gm45841-201ENSMUST00000207700 164 ntBASIC9.24□□□□□ -0.93
Herc1E9PZP8 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Herc1E9PZP8 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Gm17837-201ENSMUST00000186435 985 ntBASIC9.23□□□□□ -0.93
Herc1E9PZP8 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Gm43182-201ENSMUST00000199476 2528 ntBASIC9.23□□□□□ -0.93
Herc1E9PZP8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Gm38294-201ENSMUST00000192831 381 ntBASIC9.23□□□□□ -0.93
Herc1E9PZP8 CT009713.10-202ENSMUST00000225734 696 ntBASIC9.23□□□□□ -0.93
Herc1E9PZP8 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Herc1E9PZP8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC9.22□□□□□ -0.93
Herc1E9PZP8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Gm24694-201ENSMUST00000180054 110 ntBASIC9.22□□□□□ -0.93
Herc1E9PZP8 Gm27838-201ENSMUST00000184829 128 ntBASIC9.22□□□□□ -0.93
Herc1E9PZP8 Gm27663-201ENSMUST00000184839 110 ntBASIC9.22□□□□□ -0.93
Herc1E9PZP8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Gm42922-201ENSMUST00000195887 2078 ntBASIC9.22□□□□□ -0.93
Herc1E9PZP8 Gm15743-202ENSMUST00000182690 1901 ntBASIC9.22□□□□□ -0.93
Herc1E9PZP8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Gm18688-201ENSMUST00000204695 1859 ntBASIC9.22□□□□□ -0.93
Herc1E9PZP8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Gm15693-201ENSMUST00000120470 637 ntBASIC9.22□□□□□ -0.93
Herc1E9PZP8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Gm45167-201ENSMUST00000208007 322 ntBASIC9.22□□□□□ -0.93
Herc1E9PZP8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Herc1E9PZP8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms