Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hfm1D3Z4R1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hfm1D3Z4R1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Hfm1D3Z4R1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
Hfm1D3Z4R1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Hfm1D3Z4R1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
Hfm1D3Z4R1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Hfm1D3Z4R1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Hfm1D3Z4R1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC23.07■■□□□ 1.28
Hfm1D3Z4R1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC23.07■■□□□ 1.28
Hfm1D3Z4R1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC23.07■■□□□ 1.28
Hfm1D3Z4R1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Hfm1D3Z4R1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Hfm1D3Z4R1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Hfm1D3Z4R1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hfm1D3Z4R1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hfm1D3Z4R1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Hfm1D3Z4R1 Gm11025-201ENSMUST00000140773 466 ntBASIC23.06■■□□□ 1.28
Hfm1D3Z4R1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC23.06■■□□□ 1.28
Hfm1D3Z4R1 Gm37153-201ENSMUST00000193637 231 ntBASIC23.06■■□□□ 1.28
Hfm1D3Z4R1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Hfm1D3Z4R1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC23.06■■□□□ 1.28
Hfm1D3Z4R1 Gm42939-201ENSMUST00000197514 2205 ntBASIC23.06■■□□□ 1.28
Hfm1D3Z4R1 Gm8784-201ENSMUST00000222096 1435 ntBASIC23.06■■□□□ 1.28
Hfm1D3Z4R1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hfm1D3Z4R1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Hfm1D3Z4R1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Hfm1D3Z4R1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Hfm1D3Z4R1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Hfm1D3Z4R1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Hfm1D3Z4R1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC23.05■■□□□ 1.28
Hfm1D3Z4R1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Hfm1D3Z4R1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Hfm1D3Z4R1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hfm1D3Z4R1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hfm1D3Z4R1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Hfm1D3Z4R1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hfm1D3Z4R1 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC23.04■■□□□ 1.28
Hfm1D3Z4R1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC23.04■■□□□ 1.28
Hfm1D3Z4R1 AC117588.1-201ENSMUST00000228510 999 ntBASIC23.04■■□□□ 1.28
Hfm1D3Z4R1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hfm1D3Z4R1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hfm1D3Z4R1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hfm1D3Z4R1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hfm1D3Z4R1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hfm1D3Z4R1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hfm1D3Z4R1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hfm1D3Z4R1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Hfm1D3Z4R1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Hfm1D3Z4R1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hfm1D3Z4R1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
Hfm1D3Z4R1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC23.03■■□□□ 1.28
Hfm1D3Z4R1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Hfm1D3Z4R1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Hfm1D3Z4R1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hfm1D3Z4R1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hfm1D3Z4R1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC23.03■■□□□ 1.28
Hfm1D3Z4R1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hfm1D3Z4R1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hfm1D3Z4R1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Hfm1D3Z4R1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hfm1D3Z4R1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hfm1D3Z4R1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hfm1D3Z4R1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hfm1D3Z4R1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hfm1D3Z4R1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Hfm1D3Z4R1 Gm4899-201ENSMUST00000178708 719 ntBASIC23.02■■□□□ 1.28
Hfm1D3Z4R1 Gm44872-201ENSMUST00000207864 420 ntBASIC23.02■■□□□ 1.28
Hfm1D3Z4R1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hfm1D3Z4R1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hfm1D3Z4R1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hfm1D3Z4R1 Gm11620-201ENSMUST00000118770 1845 ntBASIC23.02■■□□□ 1.28
Hfm1D3Z4R1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hfm1D3Z4R1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Hfm1D3Z4R1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Hfm1D3Z4R1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hfm1D3Z4R1 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hfm1D3Z4R1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hfm1D3Z4R1 Gm45167-201ENSMUST00000208007 322 ntBASIC23.01■■□□□ 1.27
Hfm1D3Z4R1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hfm1D3Z4R1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hfm1D3Z4R1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Hfm1D3Z4R1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hfm1D3Z4R1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hfm1D3Z4R1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Hfm1D3Z4R1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hfm1D3Z4R1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Hfm1D3Z4R1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hfm1D3Z4R1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hfm1D3Z4R1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hfm1D3Z4R1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hfm1D3Z4R1 Gm37194-201ENSMUST00000193092 3031 ntBASIC23■■□□□ 1.27
Hfm1D3Z4R1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC23■■□□□ 1.27
Hfm1D3Z4R1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Hfm1D3Z4R1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC23■■□□□ 1.27
Hfm1D3Z4R1 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Hfm1D3Z4R1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Hfm1D3Z4R1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC23■■□□□ 1.27
Hfm1D3Z4R1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Hfm1D3Z4R1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms