Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.75□□□□□ -0.05
Shank1D3YZU1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.75□□□□□ -0.05
Shank1D3YZU1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.74□□□□□ -0.05
Shank1D3YZU1 Gm24513-201ENSMUST00000174964 138 ntBASIC14.74□□□□□ -0.05
Shank1D3YZU1 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.74□□□□□ -0.05
Shank1D3YZU1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shank1D3YZU1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Shank1D3YZU1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.74□□□□□ -0.05
Shank1D3YZU1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Shank1D3YZU1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shank1D3YZU1 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.74□□□□□ -0.05
Shank1D3YZU1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shank1D3YZU1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Gm27628-201ENSMUST00000184911 107 ntBASIC14.73□□□□□ -0.05
Shank1D3YZU1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shank1D3YZU1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shank1D3YZU1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.73□□□□□ -0.05
Shank1D3YZU1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shank1D3YZU1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shank1D3YZU1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shank1D3YZU1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shank1D3YZU1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shank1D3YZU1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shank1D3YZU1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.72□□□□□ -0.05
Shank1D3YZU1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Shank1D3YZU1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shank1D3YZU1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shank1D3YZU1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Shank1D3YZU1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.72□□□□□ -0.05
Shank1D3YZU1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shank1D3YZU1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.72□□□□□ -0.05
Shank1D3YZU1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shank1D3YZU1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shank1D3YZU1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shank1D3YZU1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shank1D3YZU1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.72□□□□□ -0.05
Shank1D3YZU1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shank1D3YZU1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shank1D3YZU1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Shank1D3YZU1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shank1D3YZU1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shank1D3YZU1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.71□□□□□ -0.05
Shank1D3YZU1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Shank1D3YZU1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.71□□□□□ -0.05
Shank1D3YZU1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.71□□□□□ -0.05
Shank1D3YZU1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.71□□□□□ -0.05
Shank1D3YZU1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.71□□□□□ -0.05
Shank1D3YZU1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shank1D3YZU1 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Shank1D3YZU1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms