Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx8D3YU81 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx8D3YU81 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx8D3YU81 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Gm11355-201ENSMUST00000121120 306 ntBASIC17.48■□□□□ 0.39
Rfx8D3YU81 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx8D3YU81 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.47■□□□□ 0.39
Rfx8D3YU81 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx8D3YU81 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx8D3YU81 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx8D3YU81 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx8D3YU81 Gm11336-201ENSMUST00000118168 334 ntBASIC17.46■□□□□ 0.39
Rfx8D3YU81 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rfx8D3YU81 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx8D3YU81 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx8D3YU81 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx8D3YU81 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Rfx8D3YU81 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx8D3YU81 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx8D3YU81 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx8D3YU81 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx8D3YU81 Dancr-204ENSMUST00000132389 2347 ntBASIC17.46■□□□□ 0.38
Rfx8D3YU81 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx8D3YU81 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx8D3YU81 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx8D3YU81 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx8D3YU81 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.45■□□□□ 0.38
Rfx8D3YU81 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.45■□□□□ 0.38
Rfx8D3YU81 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rfx8D3YU81 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Rfx8D3YU81 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx8D3YU81 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx8D3YU81 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx8D3YU81 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx8D3YU81 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rfx8D3YU81 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rfx8D3YU81 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx8D3YU81 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rfx8D3YU81 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx8D3YU81 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Gm9013-201ENSMUST00000132939 882 ntBASIC17.44■□□□□ 0.38
Rfx8D3YU81 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx8D3YU81 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms