Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.91■□□□□ 0.3
Col4a6B1AVK5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a6B1AVK5 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a6B1AVK5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a6B1AVK5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Col4a6B1AVK5 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a6B1AVK5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a6B1AVK5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a6B1AVK5 Gm13597-201ENSMUST00000121239 375 ntBASIC16.9■□□□□ 0.3
Col4a6B1AVK5 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a6B1AVK5 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.9■□□□□ 0.3
Col4a6B1AVK5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.9■□□□□ 0.3
Col4a6B1AVK5 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a6B1AVK5 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Col4a6B1AVK5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a6B1AVK5 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a6B1AVK5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.9■□□□□ 0.3
Col4a6B1AVK5 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.9■□□□□ 0.3
Col4a6B1AVK5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Col4a6B1AVK5 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
Col4a6B1AVK5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a6B1AVK5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Col4a6B1AVK5 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.89■□□□□ 0.29
Col4a6B1AVK5 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.89■□□□□ 0.29
Col4a6B1AVK5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a6B1AVK5 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a6B1AVK5 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a6B1AVK5 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a6B1AVK5 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col4a6B1AVK5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col4a6B1AVK5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Col4a6B1AVK5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col4a6B1AVK5 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Gm27300-201ENSMUST00000184085 97 ntBASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Gm27335-201ENSMUST00000184758 97 ntBASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col4a6B1AVK5 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a6B1AVK5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.87■□□□□ 0.29
Col4a6B1AVK5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a6B1AVK5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a6B1AVK5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a6B1AVK5 Gm26308-201ENSMUST00000157768 69 ntBASIC16.87■□□□□ 0.29
Col4a6B1AVK5 Gm18622-201ENSMUST00000219361 595 ntBASIC16.87■□□□□ 0.29
Col4a6B1AVK5 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.87■□□□□ 0.29
Col4a6B1AVK5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a6B1AVK5 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.87■□□□□ 0.29
Col4a6B1AVK5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a6B1AVK5 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a6B1AVK5 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Col4a6B1AVK5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col4a6B1AVK5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Col4a6B1AVK5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.86■□□□□ 0.29
Col4a6B1AVK5 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.86■□□□□ 0.29
Col4a6B1AVK5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms