Protein–RNA interactions for Protein: A0A1L1SQF0

Uncharacterized protein (Fragment), mousemouse

Predictions only

Length 893 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1L1SQF0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
A0A1L1SQF0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
A0A1L1SQF0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
A0A1L1SQF0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
A0A1L1SQF0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
A0A1L1SQF0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
A0A1L1SQF0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
A0A1L1SQF0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
A0A1L1SQF0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
A0A1L1SQF0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
A0A1L1SQF0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
A0A1L1SQF0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
A0A1L1SQF0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
A0A1L1SQF0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
A0A1L1SQF0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
A0A1L1SQF0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
A0A1L1SQF0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.64■□□□□ 0.57
A0A1L1SQF0 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.64■□□□□ 0.57
A0A1L1SQF0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
A0A1L1SQF0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
A0A1L1SQF0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
A0A1L1SQF0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
A0A1L1SQF0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
A0A1L1SQF0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
A0A1L1SQF0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
A0A1L1SQF0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
A0A1L1SQF0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
A0A1L1SQF0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
A0A1L1SQF0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
A0A1L1SQF0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1L1SQF0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
A0A1L1SQF0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1L1SQF0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1L1SQF0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
A0A1L1SQF0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1L1SQF0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1L1SQF0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1L1SQF0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1L1SQF0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.63■□□□□ 0.57
A0A1L1SQF0 Mir1199-201ENSMUST00000117015 119 ntBASIC18.63■□□□□ 0.57
A0A1L1SQF0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1L1SQF0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1L1SQF0 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC18.63■□□□□ 0.57
A0A1L1SQF0 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.63■□□□□ 0.57
A0A1L1SQF0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1L1SQF0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
A0A1L1SQF0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1L1SQF0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.63■□□□□ 0.57
A0A1L1SQF0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1L1SQF0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
A0A1L1SQF0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
A0A1L1SQF0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
A0A1L1SQF0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
A0A1L1SQF0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
A0A1L1SQF0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
A0A1L1SQF0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
A0A1L1SQF0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
A0A1L1SQF0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
A0A1L1SQF0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
A0A1L1SQF0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
A0A1L1SQF0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
A0A1L1SQF0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
A0A1L1SQF0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.62■□□□□ 0.57
A0A1L1SQF0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
A0A1L1SQF0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
A0A1L1SQF0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.62■□□□□ 0.57
A0A1L1SQF0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.62■□□□□ 0.57
A0A1L1SQF0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
A0A1L1SQF0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
A0A1L1SQF0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.62■□□□□ 0.57
A0A1L1SQF0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
A0A1L1SQF0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.62■□□□□ 0.57
A0A1L1SQF0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
A0A1L1SQF0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.61■□□□□ 0.57
A0A1L1SQF0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
A0A1L1SQF0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms