Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Atg4a-psA0A0G2JFS9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Atg4a-psA0A0G2JFS9 Gm9013-201ENSMUST00000132939 882 ntBASIC20.08■□□□□ 0.81
Atg4a-psA0A0G2JFS9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.08■□□□□ 0.81
Atg4a-psA0A0G2JFS9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.08■□□□□ 0.81
Atg4a-psA0A0G2JFS9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Atg4a-psA0A0G2JFS9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Atg4a-psA0A0G2JFS9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Atg4a-psA0A0G2JFS9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20.05■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.05■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.05■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.05■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Atg4a-psA0A0G2JFS9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms