Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Trbv3A0A0A6YYE2 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm5408-201ENSMUST00000197998 747 ntBASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv3A0A0A6YYE2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm2011-201ENSMUST00000203124 1263 ntBASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.76□□□□□ -0.37
Trbv3A0A0A6YYE2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm7290-201ENSMUST00000104990 617 ntBASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm12918-201ENSMUST00000120234 636 ntBASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm15710-201ENSMUST00000121821 636 ntBASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm5075-201ENSMUST00000196916 622 ntBASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trbv3A0A0A6YYE2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Trbv3A0A0A6YYE2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms