Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-1A0A075B5Z8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav6-1A0A075B5Z8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-1A0A075B5Z8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-1A0A075B5Z8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-1A0A075B5Z8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Trav6-1A0A075B5Z8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-1A0A075B5Z8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-1A0A075B5Z8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-1A0A075B5Z8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-1A0A075B5Z8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-1A0A075B5Z8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Gm7638-201ENSMUST00000121348 967 ntBASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Gm10602-201ENSMUST00000098239 609 ntBASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-1A0A075B5Z8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Gm20049-201ENSMUST00000219950 730 ntBASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-1A0A075B5Z8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-1A0A075B5Z8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms