Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AL935212.3-201ENST00000450729 284 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.16□□□□□ -1.58
POLR2AP24928 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.16□□□□□ -1.58
POLR2AP24928 AC010424.1-201ENST00000506336 297 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.16□□□□□ -1.58
POLR2AP24928 AC087359.1-201ENST00000508335 1740 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 AC008565.1-201ENST00000509046 885 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.16□□□□□ -1.58
POLR2AP24928 OR5G4P-201ENST00000525251 760 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 DEFB130C-202ENST00000530001 230 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.16□□□□□ -1.58
POLR2AP24928 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.16□□□□□ -1.58
POLR2AP24928 NBEAP1-201ENST00000554452 979 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.16□□□□□ -1.58
POLR2AP24928 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.16□□□□□ -1.58
POLR2AP24928 AC007159.1-201ENST00000566529 4706 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.16□□□□□ -1.58
POLR2AP24928 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.16□□□□□ -1.58
POLR2AP24928 AL360012.1-201ENST00000602813 131 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 U6atac.1-201ENST00000616025 117 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
POLR2AP24928 NCOA4P2-201ENST00000340589 1813 ntBASIC5.16□□□□□ -1.58
POLR2AP24928 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
POLR2AP24928 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
POLR2AP24928 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
POLR2AP24928 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.15□□□□□ -1.58
POLR2AP24928 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
POLR2AP24928 AC012020.1-201ENST00000624541 1728 ntBASIC5.15□□□□□ -1.58
POLR2AP24928 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
POLR2AP24928 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
POLR2AP24928 SNORA9-201ENST00000384215 133 ntBASIC5.15□□□□□ -1.58
POLR2AP24928 SNORD65-201ENST00000391079 73 ntBASIC5.15□□□□□ -1.58
POLR2AP24928 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
POLR2AP24928 MTND1P2-201ENST00000430604 821 ntBASIC5.15□□□□□ -1.58
POLR2AP24928 MOB1AP1-201ENST00000430903 535 ntBASIC5.15□□□□□ -1.58
POLR2AP24928 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.15□□□□□ -1.58
POLR2AP24928 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.15□□□□□ -1.58
POLR2AP24928 AP000936.2-201ENST00000447151 681 ntBASIC5.15□□□□□ -1.58
POLR2AP24928 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.15□□□□□ -1.58
POLR2AP24928 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.15□□□□□ -1.58
POLR2AP24928 AC021660.1-201ENST00000465006 554 ntBASIC5.15□□□□□ -1.58
POLR2AP24928 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.15□□□□□ -1.58
POLR2AP24928 RNU6-232P-201ENST00000517144 64 ntBASIC5.15□□□□□ -1.58
POLR2AP24928 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.15□□□□□ -1.58
POLR2AP24928 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.15□□□□□ -1.58
POLR2AP24928 AP000916.1-201ENST00000533869 835 ntBASIC5.15□□□□□ -1.58
POLR2AP24928 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
POLR2AP24928 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.15□□□□□ -1.58
POLR2AP24928 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.15□□□□□ -1.58
POLR2AP24928 AC120057.2-201ENST00000571520 271 ntBASIC5.15□□□□□ -1.58
POLR2AP24928 AC130352.1-201ENST00000602979 661 ntBASIC5.15□□□□□ -1.58
POLR2AP24928 AC005021.1-201ENST00000608730 355 ntBASIC5.15□□□□□ -1.58
POLR2AP24928 AC109347.2-201ENST00000610220 349 ntBASIC5.15□□□□□ -1.58
POLR2AP24928 AC100793.4-201ENST00000613683 429 ntBASIC5.15□□□□□ -1.58
POLR2AP24928 VN1R7P-201ENST00000619242 903 ntBASIC5.15□□□□□ -1.58
POLR2AP24928 AL392088.2-201ENST00000637607 285 ntBASIC5.15□□□□□ -1.58
POLR2AP24928 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.15□□□□□ -1.58
POLR2AP24928 ZNF833P-201ENST00000424938 1494 ntBASIC5.15□□□□□ -1.58
POLR2AP24928 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.15□□□□□ -1.59
POLR2AP24928 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
POLR2AP24928 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
POLR2AP24928 AL133264.1-201ENST00000407157 562 ntBASIC5.15□□□□□ -1.59
POLR2AP24928 AC105402.1-201ENST00000413336 545 ntBASIC5.15□□□□□ -1.59
POLR2AP24928 AC009237.5-201ENST00000414271 501 ntBASIC5.15□□□□□ -1.59
POLR2AP24928 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.15□□□□□ -1.59
POLR2AP24928 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.15□□□□□ -1.59
POLR2AP24928 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.15□□□□□ -1.59
POLR2AP24928 MTATP6P23-201ENST00000440153 476 ntBASIC5.15□□□□□ -1.59
POLR2AP24928 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.15□□□□□ -1.59
POLR2AP24928 RFC5P1-201ENST00000454419 874 ntBASIC5.15□□□□□ -1.59
POLR2AP24928 RNA5SP246-201ENST00000458909 119 ntBASIC5.15□□□□□ -1.59
POLR2AP24928 SETP11-201ENST00000473027 690 ntBASIC5.15□□□□□ -1.59
POLR2AP24928 AC090686.1-201ENST00000481577 749 ntBASIC5.15□□□□□ -1.59
POLR2AP24928 AF213884.1-201ENST00000488102 463 ntBASIC5.15□□□□□ -1.59
POLR2AP24928 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.15□□□□□ -1.59
POLR2AP24928 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.15□□□□□ -1.59
POLR2AP24928 DSTNP2-201ENST00000504533 515 ntBASIC5.15□□□□□ -1.59
POLR2AP24928 PDCL2P2-201ENST00000533651 189 ntBASIC5.15□□□□□ -1.59
POLR2AP24928 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.15□□□□□ -1.59
POLR2AP24928 AC027104.1-201ENST00000563702 681 ntBASIC5.15□□□□□ -1.59
POLR2AP24928 AL512347.1-201ENST00000566420 503 ntBASIC5.15□□□□□ -1.59
POLR2AP24928 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.15□□□□□ -1.59
POLR2AP24928 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.15□□□□□ -1.59
POLR2AP24928 AL592494.3-201ENST00000609485 464 ntBASIC5.15□□□□□ -1.59
POLR2AP24928 AC068944.2-201ENST00000610373 403 ntBASIC5.15□□□□□ -1.59
POLR2AP24928 AC024595.1-201ENST00000623088 387 ntBASIC5.15□□□□□ -1.59
POLR2AP24928 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.15□□□□□ -1.59
POLR2AP24928 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.14□□□□□ -1.59
POLR2AP24928 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
POLR2AP24928 AP001029.2-203ENST00000589795 4910 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.14□□□□□ -1.59
POLR2AP24928 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
POLR2AP24928 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
POLR2AP24928 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.14□□□□□ -1.59
POLR2AP24928 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
POLR2AP24928 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.14□□□□□ -1.59
POLR2AP24928 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
POLR2AP24928 AC004520.1-201ENST00000608362 1413 ntBASIC5.14□□□□□ -1.59
POLR2AP24928 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
POLR2AP24928 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms