Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.76■□□□□ 0.75
Lgr5Q9Z1P4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Lgr5Q9Z1P4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.76■□□□□ 0.75
Lgr5Q9Z1P4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lgr5Q9Z1P4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lgr5Q9Z1P4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lgr5Q9Z1P4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.76■□□□□ 0.75
Lgr5Q9Z1P4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lgr5Q9Z1P4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lgr5Q9Z1P4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lgr5Q9Z1P4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lgr5Q9Z1P4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lgr5Q9Z1P4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.75■□□□□ 0.75
Lgr5Q9Z1P4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lgr5Q9Z1P4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.75■□□□□ 0.75
Lgr5Q9Z1P4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lgr5Q9Z1P4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.75■□□□□ 0.75
Lgr5Q9Z1P4 Psmb5-202ENSMUST00000227257 622 ntBASIC19.75■□□□□ 0.75
Lgr5Q9Z1P4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lgr5Q9Z1P4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lgr5Q9Z1P4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Lgr5Q9Z1P4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lgr5Q9Z1P4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Lgr5Q9Z1P4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lgr5Q9Z1P4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lgr5Q9Z1P4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Lgr5Q9Z1P4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.74■□□□□ 0.75
Lgr5Q9Z1P4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Lgr5Q9Z1P4 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.74■□□□□ 0.75
Lgr5Q9Z1P4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.74■□□□□ 0.75
Lgr5Q9Z1P4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.74■□□□□ 0.75
Lgr5Q9Z1P4 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.74■□□□□ 0.75
Lgr5Q9Z1P4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lgr5Q9Z1P4 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.74■□□□□ 0.75
Lgr5Q9Z1P4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.74■□□□□ 0.75
Lgr5Q9Z1P4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lgr5Q9Z1P4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lgr5Q9Z1P4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lgr5Q9Z1P4 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lgr5Q9Z1P4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lgr5Q9Z1P4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lgr5Q9Z1P4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lgr5Q9Z1P4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lgr5Q9Z1P4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lgr5Q9Z1P4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lgr5Q9Z1P4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lgr5Q9Z1P4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lgr5Q9Z1P4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lgr5Q9Z1P4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lgr5Q9Z1P4 Gm5264-201ENSMUST00000190584 848 ntBASIC19.73■□□□□ 0.75
Lgr5Q9Z1P4 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.73■□□□□ 0.75
Lgr5Q9Z1P4 AC154222.1-201ENSMUST00000223882 475 ntBASIC19.73■□□□□ 0.75
Lgr5Q9Z1P4 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.73■□□□□ 0.75
Lgr5Q9Z1P4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lgr5Q9Z1P4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lgr5Q9Z1P4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Lgr5Q9Z1P4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Lgr5Q9Z1P4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lgr5Q9Z1P4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lgr5Q9Z1P4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lgr5Q9Z1P4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lgr5Q9Z1P4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lgr5Q9Z1P4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lgr5Q9Z1P4 Gm4995-201ENSMUST00000117247 432 ntBASIC19.72■□□□□ 0.75
Lgr5Q9Z1P4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.72■□□□□ 0.75
Lgr5Q9Z1P4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lgr5Q9Z1P4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
Lgr5Q9Z1P4 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.72■□□□□ 0.75
Lgr5Q9Z1P4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lgr5Q9Z1P4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Lgr5Q9Z1P4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lgr5Q9Z1P4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lgr5Q9Z1P4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lgr5Q9Z1P4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lgr5Q9Z1P4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lgr5Q9Z1P4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lgr5Q9Z1P4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lgr5Q9Z1P4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Lgr5Q9Z1P4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lgr5Q9Z1P4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lgr5Q9Z1P4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.71■□□□□ 0.75
Lgr5Q9Z1P4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.71■□□□□ 0.75
Lgr5Q9Z1P4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lgr5Q9Z1P4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lgr5Q9Z1P4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lgr5Q9Z1P4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lgr5Q9Z1P4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Lgr5Q9Z1P4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lgr5Q9Z1P4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lgr5Q9Z1P4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lgr5Q9Z1P4 Gm12497-201ENSMUST00000138778 237 ntBASIC19.7■□□□□ 0.74
Lgr5Q9Z1P4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.7■□□□□ 0.74
Lgr5Q9Z1P4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lgr5Q9Z1P4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Lgr5Q9Z1P4 Gm27628-201ENSMUST00000184911 107 ntBASIC19.7■□□□□ 0.74
Lgr5Q9Z1P4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
Lgr5Q9Z1P4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Lgr5Q9Z1P4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lgr5Q9Z1P4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.7■□□□□ 0.74
Lgr5Q9Z1P4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms