Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip2Q9Z0H8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip2Q9Z0H8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip2Q9Z0H8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip2Q9Z0H8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip2Q9Z0H8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip2Q9Z0H8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip2Q9Z0H8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip2Q9Z0H8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Clip2Q9Z0H8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip2Q9Z0H8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip2Q9Z0H8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clip2Q9Z0H8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clip2Q9Z0H8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip2Q9Z0H8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Clip2Q9Z0H8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip2Q9Z0H8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Clip2Q9Z0H8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip2Q9Z0H8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip2Q9Z0H8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clip2Q9Z0H8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Clip2Q9Z0H8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip2Q9Z0H8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip2Q9Z0H8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.22■□□□□ 0.67
Clip2Q9Z0H8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip2Q9Z0H8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip2Q9Z0H8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip2Q9Z0H8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip2Q9Z0H8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip2Q9Z0H8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip2Q9Z0H8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Clip2Q9Z0H8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.21■□□□□ 0.67
Clip2Q9Z0H8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip2Q9Z0H8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip2Q9Z0H8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clip2Q9Z0H8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip2Q9Z0H8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip2Q9Z0H8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.21■□□□□ 0.67
Clip2Q9Z0H8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clip2Q9Z0H8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip2Q9Z0H8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Clip2Q9Z0H8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
Clip2Q9Z0H8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Clip2Q9Z0H8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip2Q9Z0H8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip2Q9Z0H8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip2Q9Z0H8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip2Q9Z0H8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip2Q9Z0H8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip2Q9Z0H8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.19■□□□□ 0.66
Clip2Q9Z0H8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.19■□□□□ 0.66
Clip2Q9Z0H8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clip2Q9Z0H8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip2Q9Z0H8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Clip2Q9Z0H8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clip2Q9Z0H8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Clip2Q9Z0H8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
Clip2Q9Z0H8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip2Q9Z0H8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Clip2Q9Z0H8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip2Q9Z0H8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.18■□□□□ 0.66
Clip2Q9Z0H8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Clip2Q9Z0H8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.18■□□□□ 0.66
Clip2Q9Z0H8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.18■□□□□ 0.66
Clip2Q9Z0H8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.18■□□□□ 0.66
Clip2Q9Z0H8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Clip2Q9Z0H8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Clip2Q9Z0H8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip2Q9Z0H8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Clip2Q9Z0H8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clip2Q9Z0H8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clip2Q9Z0H8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Clip2Q9Z0H8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip2Q9Z0H8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip2Q9Z0H8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip2Q9Z0H8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.17■□□□□ 0.66
Clip2Q9Z0H8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip2Q9Z0H8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clip2Q9Z0H8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms