Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim44Q9QXA7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trim44Q9QXA7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim44Q9QXA7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim44Q9QXA7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim44Q9QXA7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim44Q9QXA7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim44Q9QXA7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim44Q9QXA7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim44Q9QXA7 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim44Q9QXA7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim44Q9QXA7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim44Q9QXA7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim44Q9QXA7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim44Q9QXA7 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim44Q9QXA7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim44Q9QXA7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim44Q9QXA7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim44Q9QXA7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim44Q9QXA7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim44Q9QXA7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC19.24■□□□□ 0.67
Trim44Q9QXA7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim44Q9QXA7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Trim44Q9QXA7 Gm43060-201ENSMUST00000200621 289 ntBASIC19.24■□□□□ 0.67
Trim44Q9QXA7 Gm9988-201ENSMUST00000069786 435 ntBASIC19.24■□□□□ 0.67
Trim44Q9QXA7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trim44Q9QXA7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trim44Q9QXA7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim44Q9QXA7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim44Q9QXA7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim44Q9QXA7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim44Q9QXA7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim44Q9QXA7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim44Q9QXA7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trim44Q9QXA7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Reep4-203ENSMUST00000226563 1444 ntBASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim44Q9QXA7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim44Q9QXA7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim44Q9QXA7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim44Q9QXA7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim44Q9QXA7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Trim44Q9QXA7 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim44Q9QXA7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim44Q9QXA7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim44Q9QXA7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.22■□□□□ 0.67
Trim44Q9QXA7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim44Q9QXA7 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim44Q9QXA7 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim44Q9QXA7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim44Q9QXA7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trim44Q9QXA7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim44Q9QXA7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim44Q9QXA7 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim44Q9QXA7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim44Q9QXA7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trim44Q9QXA7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trim44Q9QXA7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim44Q9QXA7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim44Q9QXA7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim44Q9QXA7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim44Q9QXA7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Trim44Q9QXA7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim44Q9QXA7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim44Q9QXA7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim44Q9QXA7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim44Q9QXA7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim44Q9QXA7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim44Q9QXA7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim44Q9QXA7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Trim44Q9QXA7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim44Q9QXA7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim44Q9QXA7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim44Q9QXA7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim44Q9QXA7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim44Q9QXA7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim44Q9QXA7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim44Q9QXA7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim44Q9QXA7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim44Q9QXA7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Trim44Q9QXA7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim44Q9QXA7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms