Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh5Q9QUM7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Odf3b-204ENSMUST00000227834 930 ntBASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Gm5417-201ENSMUST00000079706 384 ntBASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Msh5Q9QUM7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Gm37055-201ENSMUST00000191866 133 ntBASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Gm21814-202ENSMUST00000203277 873 ntBASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Gm3375-201ENSMUST00000203929 796 ntBASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Msh5Q9QUM7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Msh5Q9QUM7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
Msh5Q9QUM7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Msh5Q9QUM7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Msh5Q9QUM7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Msh5Q9QUM7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.89■□□□□ 0.29
Msh5Q9QUM7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Msh5Q9QUM7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh5Q9QUM7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Msh5Q9QUM7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh5Q9QUM7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh5Q9QUM7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh5Q9QUM7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Msh5Q9QUM7 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC16.89■□□□□ 0.29
Msh5Q9QUM7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh5Q9QUM7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh5Q9QUM7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Msh5Q9QUM7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh5Q9QUM7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Msh5Q9QUM7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh5Q9QUM7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.89■□□□□ 0.29
Msh5Q9QUM7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh5Q9QUM7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Gm7638-201ENSMUST00000121348 967 ntBASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Msh5Q9QUM7 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms