Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trem1Q9JKE2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.9□□□□□ -0.02
Trem1Q9JKE2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trem1Q9JKE2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trem1Q9JKE2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Trem1Q9JKE2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trem1Q9JKE2 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.9□□□□□ -0.02
Trem1Q9JKE2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trem1Q9JKE2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trem1Q9JKE2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trem1Q9JKE2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Reep4-203ENSMUST00000226563 1444 ntBASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Gm9988-201ENSMUST00000069786 435 ntBASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem1Q9JKE2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms