Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Gm13186-201ENSMUST00000118031 316 ntBASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps35Q9EQH3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Vps35Q9EQH3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Gm6659-201ENSMUST00000174752 547 ntBASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Gm7977-201ENSMUST00000193787 748 ntBASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Vps35Q9EQH3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vps35Q9EQH3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vps35Q9EQH3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps35Q9EQH3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps35Q9EQH3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Vps35Q9EQH3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Vps35Q9EQH3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps35Q9EQH3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.52■□□□□ 0.24
Vps35Q9EQH3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps35Q9EQH3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps35Q9EQH3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.52■□□□□ 0.24
Vps35Q9EQH3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps35Q9EQH3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vps35Q9EQH3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps35Q9EQH3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
Vps35Q9EQH3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps35Q9EQH3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps35Q9EQH3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Vps35Q9EQH3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps35Q9EQH3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps35Q9EQH3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Vps35Q9EQH3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps35Q9EQH3 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.52■□□□□ 0.23
Vps35Q9EQH3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms