Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col4a3bpQ9EQG9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Gm45058-201ENSMUST00000205810 766 ntBASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a3bpQ9EQG9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Col4a3bpQ9EQG9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a3bpQ9EQG9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a3bpQ9EQG9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a3bpQ9EQG9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a3bpQ9EQG9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a3bpQ9EQG9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.95■□□□□ 0.62
Col4a3bpQ9EQG9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a3bpQ9EQG9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a3bpQ9EQG9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a3bpQ9EQG9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a3bpQ9EQG9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a3bpQ9EQG9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a3bpQ9EQG9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Col4a3bpQ9EQG9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a3bpQ9EQG9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a3bpQ9EQG9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.94■□□□□ 0.62
Col4a3bpQ9EQG9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a3bpQ9EQG9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a3bpQ9EQG9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a3bpQ9EQG9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a3bpQ9EQG9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a3bpQ9EQG9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a3bpQ9EQG9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Col4a3bpQ9EQG9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a3bpQ9EQG9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a3bpQ9EQG9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a3bpQ9EQG9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a3bpQ9EQG9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Col4a3bpQ9EQG9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a3bpQ9EQG9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a3bpQ9EQG9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.94■□□□□ 0.62
Col4a3bpQ9EQG9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a3bpQ9EQG9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Col4a3bpQ9EQG9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a3bpQ9EQG9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
Col4a3bpQ9EQG9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a3bpQ9EQG9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a3bpQ9EQG9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Col4a3bpQ9EQG9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a3bpQ9EQG9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a3bpQ9EQG9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a3bpQ9EQG9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a3bpQ9EQG9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a3bpQ9EQG9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a3bpQ9EQG9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Mir5130-201ENSMUST00000175160 84 ntBASIC18.92■□□□□ 0.62
Col4a3bpQ9EQG9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms