Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2aQ9DB34 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.27■□□□□ 0.36
Chmp2aQ9DB34 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp2aQ9DB34 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp2aQ9DB34 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp2aQ9DB34 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp2aQ9DB34 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp2aQ9DB34 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Chmp2aQ9DB34 Gm13186-201ENSMUST00000118031 316 ntBASIC17.27■□□□□ 0.36
Chmp2aQ9DB34 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.27■□□□□ 0.36
Chmp2aQ9DB34 Gm6659-201ENSMUST00000174752 547 ntBASIC17.27■□□□□ 0.36
Chmp2aQ9DB34 Gm23634-201ENSMUST00000175071 91 ntBASIC17.27■□□□□ 0.36
Chmp2aQ9DB34 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.27■□□□□ 0.36
Chmp2aQ9DB34 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.27■□□□□ 0.36
Chmp2aQ9DB34 Gm7977-201ENSMUST00000193787 748 ntBASIC17.27■□□□□ 0.36
Chmp2aQ9DB34 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp2aQ9DB34 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp2aQ9DB34 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Chmp2aQ9DB34 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp2aQ9DB34 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp2aQ9DB34 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp2aQ9DB34 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Chmp2aQ9DB34 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Chmp2aQ9DB34 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp2aQ9DB34 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp2aQ9DB34 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp2aQ9DB34 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp2aQ9DB34 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp2aQ9DB34 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2aQ9DB34 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2aQ9DB34 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2aQ9DB34 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.24■□□□□ 0.35
Chmp2aQ9DB34 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2aQ9DB34 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.24■□□□□ 0.35
Chmp2aQ9DB34 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2aQ9DB34 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2aQ9DB34 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.24■□□□□ 0.35
Chmp2aQ9DB34 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Chmp2aQ9DB34 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2aQ9DB34 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp2aQ9DB34 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Chmp2aQ9DB34 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Chmp2aQ9DB34 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Chmp2aQ9DB34 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Gm11336-201ENSMUST00000118168 334 ntBASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Chmp2aQ9DB34 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms