Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp4cQ9D7F7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Timm23-208ENSMUST00000226683 750 ntBASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp4cQ9D7F7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.77■□□□□ 0.76
Chmp4cQ9D7F7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chmp4cQ9D7F7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Gm18958-201ENSMUST00000174258 762 ntBASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms