Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc7Q9D541 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Gm18421-201ENSMUST00000204122 625 ntBASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Gm5417-201ENSMUST00000079706 384 ntBASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc7Q9D541 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ccdc7Q9D541 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ccdc7Q9D541 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc7Q9D541 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc7Q9D541 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc7Q9D541 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc7Q9D541 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc7Q9D541 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ccdc7Q9D541 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc7Q9D541 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ccdc7Q9D541 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc7Q9D541 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc7Q9D541 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc7Q9D541 Gm16061-201ENSMUST00000122167 857 ntBASIC19.33■□□□□ 0.68
Ccdc7Q9D541 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.33■□□□□ 0.68
Ccdc7Q9D541 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc7Q9D541 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc7Q9D541 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc7Q9D541 Gm10566-201ENSMUST00000086739 996 ntBASIC19.33■□□□□ 0.68
Ccdc7Q9D541 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc7Q9D541 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc7Q9D541 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc7Q9D541 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc7Q9D541 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc7Q9D541 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc7Q9D541 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc7Q9D541 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc7Q9D541 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Gm36967-201ENSMUST00000193814 266 ntBASIC19.32■□□□□ 0.68
Ccdc7Q9D541 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc7Q9D541 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms