Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm3404Q9D506 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm3404Q9D506 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.58■□□□□ 0.41
Gm3404Q9D506 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3404Q9D506 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3404Q9D506 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3404Q9D506 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Gm3404Q9D506 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Gm3404Q9D506 Gm11355-201ENSMUST00000121120 306 ntBASIC17.58■□□□□ 0.4
Gm3404Q9D506 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3404Q9D506 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3404Q9D506 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Gm3404Q9D506 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3404Q9D506 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Gm3404Q9D506 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3404Q9D506 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3404Q9D506 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.58■□□□□ 0.4
Gm3404Q9D506 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3404Q9D506 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3404Q9D506 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.58■□□□□ 0.4
Gm3404Q9D506 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3404Q9D506 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Gm3404Q9D506 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3404Q9D506 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3404Q9D506 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3404Q9D506 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.57■□□□□ 0.4
Gm3404Q9D506 Gm7977-201ENSMUST00000193787 748 ntBASIC17.57■□□□□ 0.4
Gm3404Q9D506 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.57■□□□□ 0.4
Gm3404Q9D506 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Gm3404Q9D506 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Gm3404Q9D506 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3404Q9D506 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3404Q9D506 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3404Q9D506 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3404Q9D506 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3404Q9D506 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3404Q9D506 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3404Q9D506 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3404Q9D506 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Gm3404Q9D506 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Gm37722-201ENSMUST00000193757 208 ntBASIC17.56■□□□□ 0.4
Gm3404Q9D506 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.56■□□□□ 0.4
Gm3404Q9D506 Gm18115-201ENSMUST00000221209 621 ntBASIC17.56■□□□□ 0.4
Gm3404Q9D506 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.56■□□□□ 0.4
Gm3404Q9D506 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Gm3404Q9D506 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3404Q9D506 AA414768-201ENSMUST00000121924 1257 ntBASIC17.55■□□□□ 0.4
Gm3404Q9D506 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.55■□□□□ 0.4
Gm3404Q9D506 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3404Q9D506 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms