Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Gm27389-201ENSMUST00000183622 195 ntBASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Gm7370-201ENSMUST00000219471 767 ntBASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.1□□□□□ -0.15
Sft2d3Q9CSV6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sft2d3Q9CSV6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sft2d3Q9CSV6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sft2d3Q9CSV6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sft2d3Q9CSV6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 Mir1668-201ENSMUST00000184114 107 ntBASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 Gm7367-201ENSMUST00000057611 492 ntBASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Sft2d3Q9CSV6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Gm21362-201ENSMUST00000194272 928 ntBASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Gm7213-201ENSMUST00000215977 950 ntBASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Sft2d3Q9CSV6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms