Protein–RNA interactions for Protein: Q9CQJ8

Ndufb9, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, mousemouse

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb9Q9CQJ8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ndufb9Q9CQJ8 Gm6623-201ENSMUST00000173570 544 ntBASIC18.81■□□□□ 0.6
Ndufb9Q9CQJ8 Gm29518-201ENSMUST00000190858 372 ntBASIC18.81■□□□□ 0.6
Ndufb9Q9CQJ8 Gm17808-201ENSMUST00000200859 894 ntBASIC18.81■□□□□ 0.6
Ndufb9Q9CQJ8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Ndufb9Q9CQJ8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ndufb9Q9CQJ8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ndufb9Q9CQJ8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ndufb9Q9CQJ8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ndufb9Q9CQJ8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ndufb9Q9CQJ8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ndufb9Q9CQJ8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ndufb9Q9CQJ8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ndufb9Q9CQJ8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ndufb9Q9CQJ8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ndufb9Q9CQJ8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ndufb9Q9CQJ8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ndufb9Q9CQJ8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ndufb9Q9CQJ8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ndufb9Q9CQJ8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ndufb9Q9CQJ8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ndufb9Q9CQJ8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ndufb9Q9CQJ8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Ndufb9Q9CQJ8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ndufb9Q9CQJ8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ndufb9Q9CQJ8 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.79■□□□□ 0.6
Ndufb9Q9CQJ8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ndufb9Q9CQJ8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 Haglr-201ENSMUST00000100000 2085 ntBASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ndufb9Q9CQJ8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ndufb9Q9CQJ8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ndufb9Q9CQJ8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ndufb9Q9CQJ8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ndufb9Q9CQJ8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.77■□□□□ 0.6
Ndufb9Q9CQJ8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ndufb9Q9CQJ8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ndufb9Q9CQJ8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ndufb9Q9CQJ8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.77■□□□□ 0.6
Ndufb9Q9CQJ8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Ndufb9Q9CQJ8 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.77■□□□□ 0.6
Ndufb9Q9CQJ8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ndufb9Q9CQJ8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ndufb9Q9CQJ8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.77■□□□□ 0.6
Ndufb9Q9CQJ8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ndufb9Q9CQJ8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ndufb9Q9CQJ8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndufb9Q9CQJ8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndufb9Q9CQJ8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ndufb9Q9CQJ8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndufb9Q9CQJ8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ndufb9Q9CQJ8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ndufb9Q9CQJ8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.76■□□□□ 0.59
Ndufb9Q9CQJ8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndufb9Q9CQJ8 Gm11950-201ENSMUST00000121615 838 ntBASIC18.76■□□□□ 0.59
Ndufb9Q9CQJ8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Ndufb9Q9CQJ8 Gm25016-201ENSMUST00000158399 131 ntBASIC18.76■□□□□ 0.59
Ndufb9Q9CQJ8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ndufb9Q9CQJ8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndufb9Q9CQJ8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndufb9Q9CQJ8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.76■□□□□ 0.59
Ndufb9Q9CQJ8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndufb9Q9CQJ8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms