Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdha3Q91Y16 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 AA414768-201ENSMUST00000121924 1257 ntBASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Gm25016-201ENSMUST00000158399 131 ntBASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdha3Q91Y16 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Gm11355-201ENSMUST00000121120 306 ntBASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Gm9013-201ENSMUST00000132939 882 ntBASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdha3Q91Y16 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdha3Q91Y16 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdha3Q91Y16 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
Pcdha3Q91Y16 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdha3Q91Y16 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdha3Q91Y16 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdha3Q91Y16 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms