Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdha9Q91Y11 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha9Q91Y11 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha9Q91Y11 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha9Q91Y11 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdha9Q91Y11 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdha9Q91Y11 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdha9Q91Y11 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdha9Q91Y11 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdha9Q91Y11 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha9Q91Y11 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha9Q91Y11 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha9Q91Y11 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha9Q91Y11 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha9Q91Y11 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha9Q91Y11 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha9Q91Y11 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha9Q91Y11 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Pcdha9Q91Y11 Gm6623-201ENSMUST00000173570 544 ntBASIC17.57■□□□□ 0.4
Pcdha9Q91Y11 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha9Q91Y11 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha9Q91Y11 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdha9Q91Y11 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha9Q91Y11 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha9Q91Y11 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha9Q91Y11 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha9Q91Y11 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha9Q91Y11 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdha9Q91Y11 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha9Q91Y11 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.56■□□□□ 0.4
Pcdha9Q91Y11 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha9Q91Y11 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha9Q91Y11 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha9Q91Y11 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha9Q91Y11 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha9Q91Y11 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha9Q91Y11 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Pcdha9Q91Y11 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdha9Q91Y11 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha9Q91Y11 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha9Q91Y11 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha9Q91Y11 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdha9Q91Y11 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha9Q91Y11 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha9Q91Y11 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.56■□□□□ 0.4
Pcdha9Q91Y11 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 Gm6345-202ENSMUST00000180900 204 ntBASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 Gm7977-201ENSMUST00000193787 748 ntBASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha9Q91Y11 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms