Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lims2Q91XD2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Lims2Q91XD2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lims2Q91XD2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lims2Q91XD2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lims2Q91XD2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Lims2Q91XD2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.86■□□□□ 0.29
Lims2Q91XD2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.86■□□□□ 0.29
Lims2Q91XD2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lims2Q91XD2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lims2Q91XD2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lims2Q91XD2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lims2Q91XD2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lims2Q91XD2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lims2Q91XD2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lims2Q91XD2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Lims2Q91XD2 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.85■□□□□ 0.29
Lims2Q91XD2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lims2Q91XD2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Lims2Q91XD2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lims2Q91XD2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.85■□□□□ 0.29
Lims2Q91XD2 Gm17971-201ENSMUST00000190239 806 ntBASIC16.85■□□□□ 0.29
Lims2Q91XD2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lims2Q91XD2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Lims2Q91XD2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lims2Q91XD2 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.85■□□□□ 0.29
Lims2Q91XD2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lims2Q91XD2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lims2Q91XD2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lims2Q91XD2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lims2Q91XD2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Gm44454-201ENSMUST00000198541 138 ntBASIC16.84■□□□□ 0.29
Lims2Q91XD2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lims2Q91XD2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Lims2Q91XD2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.83■□□□□ 0.28
Lims2Q91XD2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lims2Q91XD2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lims2Q91XD2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lims2Q91XD2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lims2Q91XD2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lims2Q91XD2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lims2Q91XD2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lims2Q91XD2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lims2Q91XD2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lims2Q91XD2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lims2Q91XD2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lims2Q91XD2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lims2Q91XD2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Lims2Q91XD2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lims2Q91XD2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.82■□□□□ 0.28
Lims2Q91XD2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lims2Q91XD2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Lims2Q91XD2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lims2Q91XD2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lims2Q91XD2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lims2Q91XD2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lims2Q91XD2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lims2Q91XD2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lims2Q91XD2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lims2Q91XD2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.82■□□□□ 0.28
Lims2Q91XD2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.82■□□□□ 0.28
Lims2Q91XD2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.82■□□□□ 0.28
Lims2Q91XD2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lims2Q91XD2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Lims2Q91XD2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Lims2Q91XD2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lims2Q91XD2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lims2Q91XD2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Lims2Q91XD2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Lims2Q91XD2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Lims2Q91XD2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms