Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gm11841-201ENSMUST00000117060 1963 ntBASIC23.39■■□□□ 1.33
Cd109Q8R422 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Cd109Q8R422 Rarb-207ENSMUST00000225921 2756 ntBASIC23.39■■□□□ 1.33
Cd109Q8R422 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Cd109Q8R422 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cd109Q8R422 AC154527.4-201ENSMUST00000224364 1667 ntBASIC23.38■■□□□ 1.33
Cd109Q8R422 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Cd109Q8R422 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Cd109Q8R422 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Cd109Q8R422 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cd109Q8R422 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC23.38■■□□□ 1.33
Cd109Q8R422 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC23.38■■□□□ 1.33
Cd109Q8R422 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cd109Q8R422 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Cd109Q8R422 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cd109Q8R422 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cd109Q8R422 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cd109Q8R422 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cd109Q8R422 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cd109Q8R422 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cd109Q8R422 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC23.37■■□□□ 1.33
Cd109Q8R422 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cd109Q8R422 Gm9172-201ENSMUST00000212092 954 ntBASIC23.37■■□□□ 1.33
Cd109Q8R422 Gm5364-201ENSMUST00000216789 889 ntBASIC23.37■■□□□ 1.33
Cd109Q8R422 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC23.37■■□□□ 1.33
Cd109Q8R422 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cd109Q8R422 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Cd109Q8R422 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cd109Q8R422 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
Cd109Q8R422 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cd109Q8R422 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cd109Q8R422 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cd109Q8R422 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Cd109Q8R422 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cd109Q8R422 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC23.36■■□□□ 1.33
Cd109Q8R422 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cd109Q8R422 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Cd109Q8R422 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC23.36■■□□□ 1.33
Cd109Q8R422 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cd109Q8R422 Gm6089-201ENSMUST00000197666 938 ntBASIC23.36■■□□□ 1.33
Cd109Q8R422 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Cd109Q8R422 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cd109Q8R422 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Cd109Q8R422 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Cd109Q8R422 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cd109Q8R422 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cd109Q8R422 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cd109Q8R422 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC23.36■■□□□ 1.33
Cd109Q8R422 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cd109Q8R422 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Cd109Q8R422 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cd109Q8R422 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC23.36■■□□□ 1.33
Cd109Q8R422 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cd109Q8R422 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC23.35■■□□□ 1.33
Cd109Q8R422 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cd109Q8R422 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cd109Q8R422 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC23.35■■□□□ 1.33
Cd109Q8R422 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC23.35■■□□□ 1.33
Cd109Q8R422 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
Cd109Q8R422 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cd109Q8R422 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cd109Q8R422 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Cd109Q8R422 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cd109Q8R422 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cd109Q8R422 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cd109Q8R422 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Cd109Q8R422 Ddx41-204ENSMUST00000224765 2199 ntBASIC23.35■■□□□ 1.33
Cd109Q8R422 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Cd109Q8R422 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC23.34■■□□□ 1.33
Cd109Q8R422 Mir6404-201ENSMUST00000183699 94 ntBASIC23.34■■□□□ 1.33
Cd109Q8R422 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Cd109Q8R422 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cd109Q8R422 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC23.34■■□□□ 1.33
Cd109Q8R422 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Cd109Q8R422 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Cd109Q8R422 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cd109Q8R422 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cd109Q8R422 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cd109Q8R422 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cd109Q8R422 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Cd109Q8R422 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cd109Q8R422 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cd109Q8R422 Gm11779-201ENSMUST00000118541 368 ntBASIC23.33■■□□□ 1.33
Cd109Q8R422 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cd109Q8R422 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC23.33■■□□□ 1.33
Cd109Q8R422 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
Cd109Q8R422 Gm6550-201ENSMUST00000187574 993 ntBASIC23.33■■□□□ 1.33
Cd109Q8R422 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC23.33■■□□□ 1.33
Cd109Q8R422 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Cd109Q8R422 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cd109Q8R422 Gm5837-201ENSMUST00000191844 1369 ntBASIC23.33■■□□□ 1.33
Cd109Q8R422 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Cd109Q8R422 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cd109Q8R422 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC23.33■■□□□ 1.33
Cd109Q8R422 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Cd109Q8R422 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Cd109Q8R422 Gm37935-201ENSMUST00000192012 982 ntBASIC23.33■■□□□ 1.32
Cd109Q8R422 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Cd109Q8R422 AC154757.1-201ENSMUST00000228289 336 ntBASIC23.33■■□□□ 1.32
Cd109Q8R422 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms