Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Chmp7Q8R1T1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chmp7Q8R1T1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chmp7Q8R1T1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chmp7Q8R1T1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Chmp7Q8R1T1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC21.13■□□□□ 0.97
Chmp7Q8R1T1 Gm25745-201ENSMUST00000174945 133 ntBASIC21.13■□□□□ 0.97
Chmp7Q8R1T1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC21.13■□□□□ 0.97
Chmp7Q8R1T1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Chmp7Q8R1T1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Chmp7Q8R1T1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chmp7Q8R1T1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chmp7Q8R1T1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chmp7Q8R1T1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Chmp7Q8R1T1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chmp7Q8R1T1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chmp7Q8R1T1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp7Q8R1T1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp7Q8R1T1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Chmp7Q8R1T1 AC127349.1-201ENSMUST00000224590 266 ntBASIC21.12■□□□□ 0.97
Chmp7Q8R1T1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp7Q8R1T1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp7Q8R1T1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp7Q8R1T1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp7Q8R1T1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp7Q8R1T1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC21.12■□□□□ 0.97
Chmp7Q8R1T1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp7Q8R1T1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp7Q8R1T1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp7Q8R1T1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp7Q8R1T1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp7Q8R1T1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chmp7Q8R1T1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 Gm10060-201ENSMUST00000212002 111 ntBASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 Gm5867-201ENSMUST00000063197 592 ntBASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chmp7Q8R1T1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 Gm27525-201ENSMUST00000184465 107 ntBASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chmp7Q8R1T1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chmp7Q8R1T1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.08■□□□□ 0.97
Chmp7Q8R1T1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chmp7Q8R1T1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chmp7Q8R1T1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Chmp7Q8R1T1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chmp7Q8R1T1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.08■□□□□ 0.97
Chmp7Q8R1T1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC21.08■□□□□ 0.97
Chmp7Q8R1T1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms