Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Gm12933-201ENSMUST00000120203 872 ntBASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Gm12382-201ENSMUST00000122005 922 ntBASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Gm37292-201ENSMUST00000192062 758 ntBASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nudcd3Q8R1N4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Nudcd3Q8R1N4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nudcd3Q8R1N4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nudcd3Q8R1N4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nudcd3Q8R1N4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Nudcd3Q8R1N4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Nudcd3Q8R1N4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Nudcd3Q8R1N4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Nudcd3Q8R1N4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Nudcd3Q8R1N4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nudcd3Q8R1N4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nudcd3Q8R1N4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nudcd3Q8R1N4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
Nudcd3Q8R1N4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nudcd3Q8R1N4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nudcd3Q8R1N4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.58■□□□□ 0.24
Nudcd3Q8R1N4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Nudcd3Q8R1N4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.58■□□□□ 0.24
Nudcd3Q8R1N4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nudcd3Q8R1N4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Nudcd3Q8R1N4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.58■□□□□ 0.24
Nudcd3Q8R1N4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nudcd3Q8R1N4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Nudcd3Q8R1N4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nudcd3Q8R1N4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Gm17661-201ENSMUST00000170317 270 ntBASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nudcd3Q8R1N4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nudcd3Q8R1N4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms