Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shtn1Q8K2Q9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shtn1Q8K2Q9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shtn1Q8K2Q9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Shtn1Q8K2Q9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Gm14494-201ENSMUST00000118786 435 ntBASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shtn1Q8K2Q9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shtn1Q8K2Q9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.45■□□□□ 0.7
Shtn1Q8K2Q9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shtn1Q8K2Q9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Shtn1Q8K2Q9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.45■□□□□ 0.7
Shtn1Q8K2Q9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.45■□□□□ 0.7
Shtn1Q8K2Q9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shtn1Q8K2Q9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Shtn1Q8K2Q9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shtn1Q8K2Q9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Shtn1Q8K2Q9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shtn1Q8K2Q9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.44■□□□□ 0.7
Shtn1Q8K2Q9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Shtn1Q8K2Q9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shtn1Q8K2Q9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shtn1Q8K2Q9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shtn1Q8K2Q9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shtn1Q8K2Q9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.44■□□□□ 0.7
Shtn1Q8K2Q9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.44■□□□□ 0.7
Shtn1Q8K2Q9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shtn1Q8K2Q9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shtn1Q8K2Q9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shtn1Q8K2Q9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Shtn1Q8K2Q9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shtn1Q8K2Q9 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.44■□□□□ 0.7
Shtn1Q8K2Q9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shtn1Q8K2Q9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.44■□□□□ 0.7
Shtn1Q8K2Q9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shtn1Q8K2Q9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shtn1Q8K2Q9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shtn1Q8K2Q9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 Gm14822-201ENSMUST00000122247 291 ntBASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 Gm7230-201ENSMUST00000173026 815 ntBASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shtn1Q8K2Q9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms