Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.34■□□□□ 0.37
Trim61Q8JZK6 Gm7729-201ENSMUST00000050143 801 ntBASIC17.34■□□□□ 0.37
Trim61Q8JZK6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim61Q8JZK6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim61Q8JZK6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Trim61Q8JZK6 Haglr-201ENSMUST00000100000 2085 ntBASIC17.33■□□□□ 0.37
Trim61Q8JZK6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.33■□□□□ 0.37
Trim61Q8JZK6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim61Q8JZK6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trim61Q8JZK6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim61Q8JZK6 Rprl3-201ENSMUST00000157400 290 ntBASIC17.33■□□□□ 0.36
Trim61Q8JZK6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim61Q8JZK6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim61Q8JZK6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim61Q8JZK6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim61Q8JZK6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim61Q8JZK6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim61Q8JZK6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim61Q8JZK6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim61Q8JZK6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim61Q8JZK6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Gm43514-201ENSMUST00000198852 424 ntBASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Gm6443-201ENSMUST00000203599 874 ntBASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim61Q8JZK6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.31■□□□□ 0.36
Trim61Q8JZK6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Gm12644-201ENSMUST00000119935 606 ntBASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim61Q8JZK6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Gm11452-201ENSMUST00000122376 690 ntBASIC17.3■□□□□ 0.36
Trim61Q8JZK6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim61Q8JZK6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim61Q8JZK6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim61Q8JZK6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim61Q8JZK6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim61Q8JZK6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim61Q8JZK6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms