Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm25016-201ENSMUST00000158399 131 ntBASIC16.89■□□□□ 0.29
CopaQ8CIE6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.89■□□□□ 0.29
CopaQ8CIE6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopaQ8CIE6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopaQ8CIE6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopaQ8CIE6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopaQ8CIE6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CopaQ8CIE6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CopaQ8CIE6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CopaQ8CIE6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopaQ8CIE6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CopaQ8CIE6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CopaQ8CIE6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Gm27389-201ENSMUST00000183622 195 ntBASIC16.88■□□□□ 0.29
CopaQ8CIE6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Gm7213-201ENSMUST00000215977 950 ntBASIC16.88■□□□□ 0.29
CopaQ8CIE6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.88■□□□□ 0.29
CopaQ8CIE6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CopaQ8CIE6 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.87■□□□□ 0.29
CopaQ8CIE6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CopaQ8CIE6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CopaQ8CIE6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CopaQ8CIE6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CopaQ8CIE6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CopaQ8CIE6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CopaQ8CIE6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CopaQ8CIE6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CopaQ8CIE6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CopaQ8CIE6 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.87■□□□□ 0.29
CopaQ8CIE6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.87■□□□□ 0.29
CopaQ8CIE6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CopaQ8CIE6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CopaQ8CIE6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CopaQ8CIE6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CopaQ8CIE6 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.87■□□□□ 0.29
CopaQ8CIE6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.86■□□□□ 0.29
CopaQ8CIE6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.86■□□□□ 0.29
CopaQ8CIE6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CopaQ8CIE6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CopaQ8CIE6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CopaQ8CIE6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CopaQ8CIE6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CopaQ8CIE6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CopaQ8CIE6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CopaQ8CIE6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.85■□□□□ 0.29
CopaQ8CIE6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.85■□□□□ 0.29
CopaQ8CIE6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CopaQ8CIE6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CopaQ8CIE6 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.85■□□□□ 0.29
CopaQ8CIE6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CopaQ8CIE6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CopaQ8CIE6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CopaQ8CIE6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.85■□□□□ 0.29
CopaQ8CIE6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CopaQ8CIE6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CopaQ8CIE6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CopaQ8CIE6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CopaQ8CIE6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CopaQ8CIE6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms