Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clip4Q8CI96 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clip4Q8CI96 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clip4Q8CI96 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clip4Q8CI96 Gm9731-201ENSMUST00000209480 747 ntBASIC16.69■□□□□ 0.26
Clip4Q8CI96 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Clip4Q8CI96 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Clip4Q8CI96 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clip4Q8CI96 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clip4Q8CI96 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clip4Q8CI96 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clip4Q8CI96 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clip4Q8CI96 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clip4Q8CI96 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.68■□□□□ 0.26
Clip4Q8CI96 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clip4Q8CI96 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Clip4Q8CI96 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.68■□□□□ 0.26
Clip4Q8CI96 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Gm7977-201ENSMUST00000193787 748 ntBASIC16.68■□□□□ 0.26
Clip4Q8CI96 Gm18959-201ENSMUST00000208954 655 ntBASIC16.68■□□□□ 0.26
Clip4Q8CI96 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clip4Q8CI96 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.67■□□□□ 0.26
Clip4Q8CI96 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Il3ra-202ENSMUST00000223589 738 ntBASIC16.67■□□□□ 0.26
Clip4Q8CI96 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.67■□□□□ 0.26
Clip4Q8CI96 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.66■□□□□ 0.26
Clip4Q8CI96 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Clip4Q8CI96 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clip4Q8CI96 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.65■□□□□ 0.26
Clip4Q8CI96 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clip4Q8CI96 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clip4Q8CI96 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.65■□□□□ 0.26
Clip4Q8CI96 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clip4Q8CI96 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clip4Q8CI96 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clip4Q8CI96 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Clip4Q8CI96 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clip4Q8CI96 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms