Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc5Q8CG46 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc5Q8CG46 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc5Q8CG46 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Smc5Q8CG46 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc5Q8CG46 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc5Q8CG46 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.48■□□□□ 0.87
Smc5Q8CG46 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc5Q8CG46 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Smc5Q8CG46 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc5Q8CG46 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc5Q8CG46 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc5Q8CG46 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc5Q8CG46 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smc5Q8CG46 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc5Q8CG46 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc5Q8CG46 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Smc5Q8CG46 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc5Q8CG46 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC20.47■□□□□ 0.87
Smc5Q8CG46 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc5Q8CG46 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.47■□□□□ 0.87
Smc5Q8CG46 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc5Q8CG46 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smc5Q8CG46 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc5Q8CG46 Ntrk2-205ENSMUST00000224402 2284 ntBASIC20.47■□□□□ 0.87
Smc5Q8CG46 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc5Q8CG46 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc5Q8CG46 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc5Q8CG46 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc5Q8CG46 AC153526.5-201ENSMUST00000218661 2147 ntBASIC20.46■□□□□ 0.87
Smc5Q8CG46 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc5Q8CG46 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc5Q8CG46 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc5Q8CG46 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc5Q8CG46 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.46■□□□□ 0.87
Smc5Q8CG46 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc5Q8CG46 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc5Q8CG46 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc5Q8CG46 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc5Q8CG46 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smc5Q8CG46 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc5Q8CG46 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc5Q8CG46 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smc5Q8CG46 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Smc5Q8CG46 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.45■□□□□ 0.86
Smc5Q8CG46 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc5Q8CG46 Gm21814-202ENSMUST00000203277 873 ntBASIC20.45■□□□□ 0.86
Smc5Q8CG46 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Smc5Q8CG46 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.45■□□□□ 0.86
Smc5Q8CG46 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc5Q8CG46 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Smc5Q8CG46 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc5Q8CG46 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc5Q8CG46 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smc5Q8CG46 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc5Q8CG46 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.44■□□□□ 0.86
Smc5Q8CG46 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.44■□□□□ 0.86
Smc5Q8CG46 Gm715-201ENSMUST00000117865 831 ntBASIC20.44■□□□□ 0.86
Smc5Q8CG46 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.44■□□□□ 0.86
Smc5Q8CG46 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc5Q8CG46 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.44■□□□□ 0.86
Smc5Q8CG46 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.44■□□□□ 0.86
Smc5Q8CG46 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc5Q8CG46 Gm44616-201ENSMUST00000206417 1732 ntBASIC20.44■□□□□ 0.86
Smc5Q8CG46 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc5Q8CG46 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Smc5Q8CG46 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc5Q8CG46 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc5Q8CG46 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC20.43■□□□□ 0.86
Smc5Q8CG46 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc5Q8CG46 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC20.43■□□□□ 0.86
Smc5Q8CG46 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smc5Q8CG46 Gm42473-201ENSMUST00000201056 2291 ntBASIC20.43■□□□□ 0.86
Smc5Q8CG46 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smc5Q8CG46 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc5Q8CG46 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc5Q8CG46 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc5Q8CG46 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc5Q8CG46 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC20.43■□□□□ 0.86
Smc5Q8CG46 Gm44450-201ENSMUST00000199528 114 ntBASIC20.43■□□□□ 0.86
Smc5Q8CG46 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Smc5Q8CG46 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms