Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
E4f1Q8CCE9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
E4f1Q8CCE9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
E4f1Q8CCE9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
E4f1Q8CCE9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
E4f1Q8CCE9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
E4f1Q8CCE9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
E4f1Q8CCE9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.45■□□□□ 0.7
E4f1Q8CCE9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
E4f1Q8CCE9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
E4f1Q8CCE9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
E4f1Q8CCE9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
E4f1Q8CCE9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
E4f1Q8CCE9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Gm27357-201ENSMUST00000183754 135 ntBASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
E4f1Q8CCE9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
E4f1Q8CCE9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.42■□□□□ 0.7
E4f1Q8CCE9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.42■□□□□ 0.7
E4f1Q8CCE9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
E4f1Q8CCE9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
E4f1Q8CCE9 Gm45328-201ENSMUST00000210942 917 ntBASIC19.42■□□□□ 0.7
E4f1Q8CCE9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.42■□□□□ 0.7
E4f1Q8CCE9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
E4f1Q8CCE9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.42■□□□□ 0.7
E4f1Q8CCE9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
E4f1Q8CCE9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
E4f1Q8CCE9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
E4f1Q8CCE9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
E4f1Q8CCE9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
E4f1Q8CCE9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
E4f1Q8CCE9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
E4f1Q8CCE9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
E4f1Q8CCE9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
E4f1Q8CCE9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
E4f1Q8CCE9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
E4f1Q8CCE9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
E4f1Q8CCE9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.41■□□□□ 0.7
E4f1Q8CCE9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
E4f1Q8CCE9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
E4f1Q8CCE9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
E4f1Q8CCE9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
E4f1Q8CCE9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
E4f1Q8CCE9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
E4f1Q8CCE9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
E4f1Q8CCE9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
E4f1Q8CCE9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
E4f1Q8CCE9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
E4f1Q8CCE9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
E4f1Q8CCE9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
E4f1Q8CCE9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
E4f1Q8CCE9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
E4f1Q8CCE9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
E4f1Q8CCE9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
E4f1Q8CCE9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
E4f1Q8CCE9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
E4f1Q8CCE9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
E4f1Q8CCE9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
E4f1Q8CCE9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
E4f1Q8CCE9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
E4f1Q8CCE9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
E4f1Q8CCE9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.4■□□□□ 0.7
E4f1Q8CCE9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
E4f1Q8CCE9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
E4f1Q8CCE9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
E4f1Q8CCE9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 144.7 ms