Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc60Q8C4J0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc60Q8C4J0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc60Q8C4J0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc60Q8C4J0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc60Q8C4J0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ccdc60Q8C4J0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC21.11■□□□□ 0.97
Ccdc60Q8C4J0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc60Q8C4J0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc60Q8C4J0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc60Q8C4J0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc60Q8C4J0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc60Q8C4J0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc60Q8C4J0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc60Q8C4J0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ccdc60Q8C4J0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC21.09■□□□□ 0.97
Ccdc60Q8C4J0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc60Q8C4J0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc60Q8C4J0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc60Q8C4J0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Ccdc60Q8C4J0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
Ccdc60Q8C4J0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc60Q8C4J0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc60Q8C4J0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc60Q8C4J0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ccdc60Q8C4J0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC21.09■□□□□ 0.97
Ccdc60Q8C4J0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC21.09■□□□□ 0.97
Ccdc60Q8C4J0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC21.09■□□□□ 0.97
Ccdc60Q8C4J0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc60Q8C4J0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc60Q8C4J0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Ccdc60Q8C4J0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc60Q8C4J0 Gm25016-201ENSMUST00000158399 131 ntBASIC21.08■□□□□ 0.97
Ccdc60Q8C4J0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC21.08■□□□□ 0.97
Ccdc60Q8C4J0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Ccdc60Q8C4J0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Ccdc60Q8C4J0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ccdc60Q8C4J0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc60Q8C4J0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC21.08■□□□□ 0.96
Ccdc60Q8C4J0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc60Q8C4J0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc60Q8C4J0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc60Q8C4J0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Gm29518-201ENSMUST00000190858 372 ntBASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc60Q8C4J0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Gm6623-201ENSMUST00000173570 544 ntBASIC21.06■□□□□ 0.96
Ccdc60Q8C4J0 Gm17808-201ENSMUST00000200859 894 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms