Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Usp44Q8C2S0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp44Q8C2S0 Gm29518-201ENSMUST00000190858 372 ntBASIC19.38■□□□□ 0.69
Usp44Q8C2S0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Usp44Q8C2S0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp44Q8C2S0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp44Q8C2S0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp44Q8C2S0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp44Q8C2S0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp44Q8C2S0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp44Q8C2S0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp44Q8C2S0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Usp44Q8C2S0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Usp44Q8C2S0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp44Q8C2S0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Gm25016-201ENSMUST00000158399 131 ntBASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp44Q8C2S0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.36■□□□□ 0.69
Usp44Q8C2S0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.36■□□□□ 0.69
Usp44Q8C2S0 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.36■□□□□ 0.69
Usp44Q8C2S0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp44Q8C2S0 Gm6623-201ENSMUST00000173570 544 ntBASIC19.36■□□□□ 0.69
Usp44Q8C2S0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp44Q8C2S0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp44Q8C2S0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp44Q8C2S0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp44Q8C2S0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp44Q8C2S0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp44Q8C2S0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Usp44Q8C2S0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp44Q8C2S0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp44Q8C2S0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp44Q8C2S0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.34■□□□□ 0.69
Usp44Q8C2S0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp44Q8C2S0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp44Q8C2S0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp44Q8C2S0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Usp44Q8C2S0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp44Q8C2S0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp44Q8C2S0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp44Q8C2S0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp44Q8C2S0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.34■□□□□ 0.69
Usp44Q8C2S0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp44Q8C2S0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp44Q8C2S0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp44Q8C2S0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp44Q8C2S0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.34■□□□□ 0.69
Usp44Q8C2S0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Usp44Q8C2S0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
Usp44Q8C2S0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp44Q8C2S0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Usp44Q8C2S0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
Usp44Q8C2S0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Usp44Q8C2S0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp44Q8C2S0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp44Q8C2S0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp44Q8C2S0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms