Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Gm29707-201ENSMUST00000196325 491 ntBASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ptcd1Q8C2E4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Gm15467-201ENSMUST00000120582 445 ntBASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ptcd1Q8C2E4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Mir5126-201ENSMUST00000175513 77 ntBASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ptcd1Q8C2E4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptcd1Q8C2E4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptcd1Q8C2E4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Ptcd1Q8C2E4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptcd1Q8C2E4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ptcd1Q8C2E4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ptcd1Q8C2E4 Gm44450-201ENSMUST00000199528 114 ntBASIC20.29■□□□□ 0.84
Ptcd1Q8C2E4 CT943659.1-201ENSMUST00000215459 326 ntBASIC20.29■□□□□ 0.84
Ptcd1Q8C2E4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.29■□□□□ 0.84
Ptcd1Q8C2E4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ptcd1Q8C2E4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ptcd1Q8C2E4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ptcd1Q8C2E4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ptcd1Q8C2E4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ptcd1Q8C2E4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ptcd1Q8C2E4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.29■□□□□ 0.84
Ptcd1Q8C2E4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Ptcd1Q8C2E4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ptcd1Q8C2E4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptcd1Q8C2E4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.28■□□□□ 0.84
Ptcd1Q8C2E4 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.28■□□□□ 0.84
Ptcd1Q8C2E4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ptcd1Q8C2E4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptcd1Q8C2E4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ptcd1Q8C2E4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ptcd1Q8C2E4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptcd1Q8C2E4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ptcd1Q8C2E4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptcd1Q8C2E4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptcd1Q8C2E4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ptcd1Q8C2E4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms