Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Usp47Q8BY87 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
Usp47Q8BY87 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Usp47Q8BY87 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Usp47Q8BY87 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Usp47Q8BY87 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Usp47Q8BY87 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Usp47Q8BY87 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Usp47Q8BY87 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Usp47Q8BY87 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Usp47Q8BY87 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Usp47Q8BY87 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Usp47Q8BY87 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Usp47Q8BY87 Gm27867-201ENSMUST00000184778 125 ntBASIC23.27■■□□□ 1.32
Usp47Q8BY87 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Usp47Q8BY87 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Usp47Q8BY87 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Usp47Q8BY87 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Usp47Q8BY87 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Usp47Q8BY87 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Usp47Q8BY87 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Usp47Q8BY87 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Usp47Q8BY87 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Usp47Q8BY87 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC23.27■■□□□ 1.32
Usp47Q8BY87 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
Usp47Q8BY87 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Usp47Q8BY87 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC23.27■■□□□ 1.31
Usp47Q8BY87 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.31
Usp47Q8BY87 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Usp47Q8BY87 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC23.27■■□□□ 1.31
Usp47Q8BY87 Birc2-201ENSMUST00000054878 378 ntBASIC23.27■■□□□ 1.31
Usp47Q8BY87 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Usp47Q8BY87 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Usp47Q8BY87 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Usp47Q8BY87 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Gm7292-201ENSMUST00000194706 2527 ntBASIC23.26■■□□□ 1.31
Usp47Q8BY87 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Gm15165-201ENSMUST00000118140 502 ntBASIC23.26■■□□□ 1.31
Usp47Q8BY87 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp47Q8BY87 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC23.26■■□□□ 1.31
Usp47Q8BY87 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Usp47Q8BY87 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp47Q8BY87 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp47Q8BY87 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Usp47Q8BY87 Gm6858-201ENSMUST00000208582 1468 ntBASIC23.25■■□□□ 1.31
Usp47Q8BY87 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp47Q8BY87 Gm26596-201ENSMUST00000180464 2655 ntBASIC23.25■■□□□ 1.31
Usp47Q8BY87 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp47Q8BY87 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp47Q8BY87 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Usp47Q8BY87 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Usp47Q8BY87 Gm7935-201ENSMUST00000100555 1278 ntBASIC23.25■■□□□ 1.31
Usp47Q8BY87 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp47Q8BY87 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Usp47Q8BY87 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC23.25■■□□□ 1.31
Usp47Q8BY87 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC23.25■■□□□ 1.31
Usp47Q8BY87 Gm7507-201ENSMUST00000183053 1008 ntBASIC23.25■■□□□ 1.31
Usp47Q8BY87 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Usp47Q8BY87 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC23.25■■□□□ 1.31
Usp47Q8BY87 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC23.25■■□□□ 1.31
Usp47Q8BY87 Gm44454-201ENSMUST00000198541 138 ntBASIC23.25■■□□□ 1.31
Usp47Q8BY87 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp47Q8BY87 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Usp47Q8BY87 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp47Q8BY87 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp47Q8BY87 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Usp47Q8BY87 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Usp47Q8BY87 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp47Q8BY87 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp47Q8BY87 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp47Q8BY87 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp47Q8BY87 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp47Q8BY87 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp47Q8BY87 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC23.24■■□□□ 1.31
Usp47Q8BY87 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC23.24■■□□□ 1.31
Usp47Q8BY87 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp47Q8BY87 Gm27459-201ENSMUST00000184860 107 ntBASIC23.24■■□□□ 1.31
Usp47Q8BY87 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp47Q8BY87 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC23.24■■□□□ 1.31
Usp47Q8BY87 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC23.24■■□□□ 1.31
Usp47Q8BY87 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Usp47Q8BY87 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Usp47Q8BY87 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC23.24■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms