Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scfd1Q8BRF7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Gm36967-201ENSMUST00000193814 266 ntBASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scfd1Q8BRF7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scfd1Q8BRF7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scfd1Q8BRF7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scfd1Q8BRF7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scfd1Q8BRF7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scfd1Q8BRF7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scfd1Q8BRF7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Scfd1Q8BRF7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scfd1Q8BRF7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Scfd1Q8BRF7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.84■□□□□ 0.61
Scfd1Q8BRF7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scfd1Q8BRF7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scfd1Q8BRF7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Scfd1Q8BRF7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scfd1Q8BRF7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scfd1Q8BRF7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scfd1Q8BRF7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scfd1Q8BRF7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.83■□□□□ 0.61
Scfd1Q8BRF7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scfd1Q8BRF7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.83■□□□□ 0.61
Scfd1Q8BRF7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scfd1Q8BRF7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scfd1Q8BRF7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scfd1Q8BRF7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.83■□□□□ 0.6
Scfd1Q8BRF7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.83■□□□□ 0.6
Scfd1Q8BRF7 Gm11452-201ENSMUST00000122376 690 ntBASIC18.83■□□□□ 0.6
Scfd1Q8BRF7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scfd1Q8BRF7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.83■□□□□ 0.6
Scfd1Q8BRF7 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.83■□□□□ 0.6
Scfd1Q8BRF7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.83■□□□□ 0.6
Scfd1Q8BRF7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scfd1Q8BRF7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scfd1Q8BRF7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scfd1Q8BRF7 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scfd1Q8BRF7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scfd1Q8BRF7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scfd1Q8BRF7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scfd1Q8BRF7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Scfd1Q8BRF7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms