Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc116Q80X53 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc116Q80X53 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc116Q80X53 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc116Q80X53 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Gm44450-201ENSMUST00000199528 114 ntBASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc116Q80X53 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Gm2274-201ENSMUST00000184539 609 ntBASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.17■□□□□ 0.18
Ccdc116Q80X53 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms