Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx55Q6ZPL9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx55Q6ZPL9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx55Q6ZPL9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx55Q6ZPL9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx55Q6ZPL9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Ddx55Q6ZPL9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx55Q6ZPL9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Gm8655-201ENSMUST00000221159 852 ntBASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx55Q6ZPL9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx55Q6ZPL9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx55Q6ZPL9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx55Q6ZPL9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx55Q6ZPL9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx55Q6ZPL9 Gm27397-201ENSMUST00000184997 107 ntBASIC18.79■□□□□ 0.6
Ddx55Q6ZPL9 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.79■□□□□ 0.6
Ddx55Q6ZPL9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx55Q6ZPL9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx55Q6ZPL9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx55Q6ZPL9 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.79■□□□□ 0.6
Ddx55Q6ZPL9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx55Q6ZPL9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx55Q6ZPL9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 Gm14822-201ENSMUST00000122247 291 ntBASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 Gm9172-201ENSMUST00000212092 954 ntBASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.78■□□□□ 0.6
Ddx55Q6ZPL9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx55Q6ZPL9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx55Q6ZPL9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx55Q6ZPL9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx55Q6ZPL9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx55Q6ZPL9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx55Q6ZPL9 Gm7222-201ENSMUST00000117512 906 ntBASIC18.77■□□□□ 0.6
Ddx55Q6ZPL9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx55Q6ZPL9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Ddx55Q6ZPL9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ddx55Q6ZPL9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx55Q6ZPL9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx55Q6ZPL9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx55Q6ZPL9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ddx55Q6ZPL9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ddx55Q6ZPL9 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 Gm25406-201ENSMUST00000157599 105 ntBASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx55Q6ZPL9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms